unzhakov
6aced1d8ac
Compactify the descriptive markdown: scope statement replaces the g_V-extraction goal, package architecture describes the single theory-only distributable, roadmap keeps calculator capabilities (C1-C8) and drops the analysis tracks, structure trees match the actual file layout, the bs_exp debug step and detector-parameter convention wording are dropped.
74 lines
3.2 KiB
Markdown
74 lines
3.2 KiB
Markdown
# Agent Instructions — beta-spectrum
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High-precision beta decay spectrum shape calculator. Since v0.5.0 the repository is dedicated solely to spectrum shape calculation: detector response, calibration, fitting and C(W)/g_V/g_A extraction live in separate, dedicated projects.
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## Stack & Commands
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```
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pytest # all tests
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nbmake notebooks/ # execute notebooks as tests
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black --check . # formatting
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ruff check . # linting
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mypy . # type checking (strict)
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bs_pnpi --nuclide Tc99 -vv --output ./output/verification.csv # debug verification
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```
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Install: `source ~/.pyenv/sci/bin/activate && pip install -e ".[dev]"`
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## Git Workflow (GitHub Flow)
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- **Never commit directly to `main`.** Always branch: `git checkout -b dev/<short-desc>`
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- **Atomic commits** with **Conventional Commits** format:
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- `feat:`, `fix:`, `docs:`, `style:`, `refactor:`, `perf:`, `test:`, `chore:`
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- Imperative mood, present tense, under 72 chars
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- WIP commits fine on dev branches — squash before final merge
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- **Commit each logical change** — don't wait for green. Use `git add -p`.
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- **Rebase over merge** for linear history: `git rebase main` before merge.
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- Delete branch locally + remotely after merge.
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- **Update project metadata on significant changes:** When a commit changes the package structure, adds/removes modules, or bumps the version, also update `TODO.md` and `README.md` to reflect the new state. This keeps documentation in sync with code.
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## TDD
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Test-first by default. For new classes/functions: write failing test first.
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- **RED** — failing test defining desired behavior
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- **GREEN** — minimal code to pass
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- **REFACTOR** — clean up, confirm tests still pass
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State which phase you're in. Name phases explicitly.
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### Python Testing Conventions
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- Tests mirror package structure: `beta_spectrum/components/foo.py` → `tests/physics/test_foo.py`
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- Shared fixtures in `tests/conftest.py`
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- Classes organized by feature area (e.g., `TestComponentBasicProperties`)
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- Descriptive names: `test_<function>_<expected_behavior>_<context>`
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- Include implementation-level assertions (type checks, pre/postconditions)
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- Use `hypothesis` for property-based tests where applicable
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- Physics tests verify: physical constraints at thresholds, positivity, monotonicity, numerical stability
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## Quality Gates
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All must pass before merge:
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```bash
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pytest # all tests (markers: property, physics, api, quality, integration, slow, requires_ensdf)
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nbmake notebooks/ # execute notebooks as tests
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black --check . # formatting
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ruff check . # linting
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mypy . # type checking (strict)
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python scripts/docs_check.py # documentation consistency (version, file refs, CLI args)
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```
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Run individually to identify failures.
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## Debug Verification (Final Step)
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After quality gates pass, run:
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```bash
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bs_pnpi --nuclide Tc99 -vv --output ./output/verification.csv --plot ./output/verification.png --log-file ./output/debug.log 2>&1 | tee ./output/debug_stdout.log
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```
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Verify parameter consistency across all components. Save artifacts to `./output/`.
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