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T

unzhakov 8314cee29c refactor: restructure metadata files for context efficiency

- Shrink global AGENTS.md: 153 → 56 lines (−63%)
  Removed: git workflow, TDD, overthinking guards, code style, reasoning protocol
  Kept: personality, git basics, thinking levels, general principles, backend
- Create project AGENTS.md: 71 lines
  Added: stack/commands, GitHub Flow git workflow, Conventional Commits,
  TDD (Python-specific), quality gates, debug verification
- Trim CONVENTIONS.md: 161 → 68 lines (−58%)
  Removed: verbose examples, redundant unit convention section,
  lengthy SpectrumComponent code example
- Delete DEVELOPMENT.md: 238 lines → 0 (migrated to AGENTS.md)
  Setup/release checklist removed (not agent concerns)
  Git workflow, TDD, quality gates, notebook QC, debug verification
  all migrated to AGENTS.md
- Update README.md project structure
Total per-session metadata: 552 → 195 lines (−65%)

2026-05-16 19:51:37 +03:00

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Agent Instructions — beta-spectrum

High-precision beta decay spectrum calculator. Extracts shape factor C(W) from ⁹⁹Tc beta spectrum to parametrize g_V coupling.

Stack & Commands

pytest                           # all tests
nbmake notebooks/                # execute notebooks as tests
black --check .                  # formatting
ruff check .                     # linting
mypy .                           # type checking (strict)
bs_pnpi --nuclide Tc99 -vv --output ./output/verification.csv  # debug verification

Install: source ~/.pyenv/sci/bin/activate && pip install -e ".[dev]"

Git Workflow (GitHub Flow)

Never commit directly to main. Always branch: git checkout -b dev/<short-desc>
Atomic commits with Conventional Commits format:
- feat:, fix:, docs:, style:, refactor:, perf:, test:, chore:
- Imperative mood, present tense, under 72 chars
- WIP commits fine on dev branches — squash before final merge
Commit each logical change — don't wait for green. Use git add -p.
Rebase over merge for linear history: git rebase main before merge.
Delete branch locally + remotely after merge.

TDD

Test-first by default. For new classes/functions: write failing test first.

RED — failing test defining desired behavior
GREEN — minimal code to pass
REFACTOR — clean up, confirm tests still pass

State which phase you're in. Name phases explicitly.

Python Testing Conventions

Tests mirror package structure: beta_spectrum/components/foo.py → tests/physics/test_foo.py
Shared fixtures in tests/conftest.py
Classes organized by feature area (e.g., TestComponentBasicProperties)
Descriptive names: test_<function>_<expected_behavior>_<context>
Include implementation-level assertions (type checks, pre/postconditions)
Use hypothesis for property-based tests where applicable
Physics tests verify: physical constraints at thresholds, positivity, monotonicity, numerical stability

Quality Gates

All must pass before merge:

pytest
nbmake notebooks/
black --check .
ruff check .
mypy .

Run individually to identify failures.

Debug Verification (Final Step)

After quality gates pass, run:

bs_pnpi --nuclide Tc99 -vv --output ./output/verification.csv --plot ./output/verification.png --log-file ./output/debug.log 2>&1 | tee ./output/debug_stdout.log

Verify parameter consistency across all components. Save artifacts to ./output/.

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